Transcript: lnc-C17orf58-1:3

Basic information

LNCipedia transcript ID: lnc-C17orf58-1:3 
LNCipedia gene ID: lnc-C17orf58-1
Location (hg19): chr17:65989856-65992549
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2694 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000266176.1|ENCT00000186458.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.9006 non-coding 
CPAT coding probability 10.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C17orf58-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C17orf58-1:3
5.0 lnc-C17orf58-1:3
5.1 lnc-CYB561-92:2
5.2 lnc-C17orf58-1:3