Transcript: lnc-C19orf44-5:1

Basic information

LNCipedia transcript ID: lnc-C19orf44-5:1 
LNCipedia gene ID: lnc-C19orf44-5
Ensembl Gene ID: ENSG00000279529
Ensembl Transcript ID: ENST00000623966
Location (hg19): chr19:16683435-16686151
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2717 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT062798; ENST00000623966.1
Alternative gene names: ENSG00000279529.1; CTD-3222D19.8; AC008764.8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.3917 non-coding 
CPAT coding probability 7.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C19orf44-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C19orf44-5:1
4.0 lnc-C19orf44-5:1
4.1 lnc-C19orf44-5:1
5.0 lnc-C19orf44-5:1
5.1 lnc-MAP1S-35:1
5.2 lnc-C19orf44-5:1