Transcript: lnc-C19orf44-8:1

Basic information

LNCipedia transcript ID: lnc-C19orf44-8:1 
LNCipedia gene ID: lnc-C19orf44-8
Ensembl Gene ID: ENSG00000269399
Ensembl Transcript ID: ENST00000595909
Location (hg19): chr19:16653557-16655625
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2069 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000595909.2
Alternative gene names: ENSG00000269399.2; CTD-3222D19.12; AC008764.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.3073 non-coding 
CPAT coding probability 1.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C19orf44-8:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C19orf44-8:1
4.1 lnc-C19orf44-8:1
5.0 lnc-C19orf44-8:1
5.1 lnc-MAP1S-37:4
5.2 lnc-C19orf44-8:1