Transcript: lnc-C19orf44-8:3

Basic information

LNCipedia transcript ID: lnc-C19orf44-8:3 
LNCipedia gene ID: lnc-C19orf44-8
Location (hg19): chr19:16653431-16660276
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5136 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000038740.1|ENCT00000202638.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.2993 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C19orf44-8:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C19orf44-8:3
5.0 lnc-C19orf44-8:3
5.1 lnc-MAP1S-37:3
5.2 lnc-C19orf44-8:3