Transcript: lnc-C21orf58-1:1

Basic information

LNCipedia transcript ID: lnc-C21orf58-1:1 
LNCipedia gene ID: lnc-C21orf58-1
Location (hg19): chr21:47874900-47878593
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1529 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000499524; NONHSAT083071
Alternative gene names: ENSG00000245754; AP000337.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.9532 non-coding 
CPAT coding probability 26.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C21orf58-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C21orf58-1:1
3.1 lnc-C21orf58-1:1
4.0 lnc-C21orf58-1:1
4.1 lnc-C21orf58-1:1
5.0 lnc-C21orf58-1:1
5.1 lnc-SLC19A1-26:4
5.2 lnc-C21orf58-1:1