Transcript: lnc-C2CD4B-11:5

Basic information

LNCipedia transcript ID: lnc-C2CD4B-11:5 
LNCipedia gene ID: lnc-C2CD4B-11
Location (hg19): chr15:62682192-62682671
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 480 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000025218.1|FTMT25800002311.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -234.5513 non-coding 
CPAT coding probability 1.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C2CD4B-11:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C2CD4B-11:5
5.0 lnc-C2CD4B-11:5
5.1 lnc-ICE2-55:4
5.2 lnc-C2CD4B-11:5