Transcript: lnc-C2CD4B-13:1

Basic information

LNCipedia transcript ID: lnc-C2CD4B-13:1 
LNCipedia gene ID: lnc-C2CD4B-13
Location (hg19): chr15:62929373-62937490
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2423 bp
Exons: 3
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000508975
Alternative gene names: ENSG00000248615


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.3964 non-coding 
CPAT coding probability 8.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C2CD4B-13:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-625H11.1.1-1:1
3.1 lnc-RP11-625H11.1.1-1:1
4.0 lnc-RP11-625H11.1.1-1:1
4.1 lnc-RP11-625H11.1.1-1:1
5.0 lnc-RP11-625H11.1.1-1:1
5.1 lnc-ICE2-58:1
5.2 lnc-C2CD4B-13:1