Transcript: lnc-C2orf40-16:1

Basic information

LNCipedia transcript ID: lnc-C2orf40-16:1 
LNCipedia gene ID: lnc-C2orf40-16
Location (hg19): chr2:106811024-106811788
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 765 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000044067.1|FTMT20800006030.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -83.7583 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C2orf40-16:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C2orf40-16:1
5.0 lnc-C2orf40-16:1
5.1 lnc-SULT1C2-23:1
5.2 lnc-C2orf40-16:1