Transcript: lnc-C2orf71-56:2

Basic information

LNCipedia transcript ID: lnc-C2orf71-56:2 
LNCipedia gene ID: lnc-C2orf71-56
RefSeq ID: NR_136317
Location (hg19): chr2:29697600-29698243
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 404 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136317.1
Alternative gene names: LOC105374389


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -318.2062 non-coding 
CPAT coding probability 2.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C2orf71-56:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-RBKS-56:2
5.1 lnc-RBKS-56:2
5.2 lnc-C2orf71-56:2