Transcript: lnc-C2orf91-4:1

Basic information

LNCipedia transcript ID: lnc-C2orf91-4:1 
LNCipedia gene ID: lnc-C2orf91-4
Location (hg19): chr2:42329148-42329924
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 358 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004216; NONHSAT070313
Alternative gene names: XLOC_002060; linc-SLC8A1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -221.4215 non-coding 
CPAT coding probability 2.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C2orf91-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC013480.1.1-4:1
3.1 lnc-AC013480.1.1-4:1
4.0 lnc-AC013480.1.1-4:1
4.1 lnc-AC013480.1.1-4:1
5.0 lnc-AC013480.1.1-4:1
5.1 lnc-MAP4K3-60:1
5.2 lnc-C2orf91-4:1