Transcript: lnc-C3orf33-3:1

Basic information

LNCipedia transcript ID: lnc-C3orf33-3:1 
LNCipedia gene ID: lnc-C3orf33-3
Location (hg19): chr3:155225371-155321814
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2283 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_2507_chr3:155225370-155321814_brain
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.7096 non-coding 
CPAT coding probability 99.86% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-C3orf33-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC104472.1-1:1
4.0 lnc-AC104472.1-1:1
4.1 lnc-AC104472.1-1:1
5.0 lnc-AC104472.1-1:1
5.1 lnc-SHOX2-35:1
5.2 lnc-C3orf33-3:1