Transcript: lnc-C3orf38-4:1

Basic information

LNCipedia transcript ID: lnc-C3orf38-4:1 
LNCipedia gene ID: lnc-C3orf38-4
Location (hg19): chr3:88261525-88267136
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 378 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_2408_chr3:88261524-88267136_placenta
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -133.414 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C3orf38-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C3orf38-4:1
4.0 lnc-C3orf38-4:1
4.1 lnc-C3orf38-4:1
5.0 lnc-C3orf38-4:1
5.1 lnc-ZNF654-6:1
5.2 lnc-C3orf38-4:1