Transcript: lnc-C3orf58-9:1

Basic information

LNCipedia transcript ID: lnc-C3orf58-9:1 
LNCipedia gene ID: lnc-C3orf58-9
Location (hg19): chr3:145091512-145098582
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5398 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT092537; FPKM1_group_22145_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.422 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C3orf58-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC107021.1-9:1
4.0 lnc-AC107021.1-9:1
4.1 lnc-AC107021.1-9:1
5.0 lnc-AC107021.1-9:1
5.1 lnc-ZIC1-15:1
5.2 lnc-C3orf58-9:1