Transcript: lnc-C3orf85-10:1

Basic information

LNCipedia transcript ID: lnc-C3orf85-10:1 
LNCipedia gene ID: lnc-C3orf85-10
Location (hg19): chr3:109326607-109338948
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1382 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_2435_chr3:109326606-109338941_whiteBloodCell
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.387 non-coding 
CPAT coding probability 0.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C3orf85-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRAT1-10:1
4.0 lnc-TRAT1-10:1
4.1 lnc-TRAT1-10:1
5.0 lnc-TRAT1-10:1
5.1 lnc-TMEM45A-71:1
5.2 lnc-C3orf85-10:1