Transcript: lnc-C4orf3-3:2

Basic information

LNCipedia transcript ID: lnc-C4orf3-3:2 
LNCipedia gene ID: lnc-C4orf3-3
RefSeq ID: NR_125931
Location (hg19): chr4:120113928-120133799
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1913 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125931; NR_125931.1
Alternative gene names: LOC101929762


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.8693 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C4orf3-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-455G16.1.1-3:2
4.0 lnc-RP11-455G16.1.1-3:2
4.1 lnc-RP11-455G16.1.1-3:2
5.0 lnc-RP11-455G16.1.1-3:2
5.1 lnc-PDE5A-6:2
5.2 lnc-C4orf3-3:2

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