Transcript: lnc-C5orf30-10:2

Basic information

LNCipedia transcript ID: lnc-C5orf30-10:2 
LNCipedia gene ID: lnc-C5orf30-10
Location (hg19): chr5:102847595-103318368
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 10568 bp
Exons: 8
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000076880.1|MICT00000286871.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.9492 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C5orf30-10:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C5orf30-10:2
5.0 lnc-C5orf30-10:2
5.1 lnc-GPR150-117:2
5.2 lnc-C5orf30-10:2