Transcript: lnc-C5orf38-1:8

Basic information

LNCipedia transcript ID: lnc-C5orf38-1:8 
LNCipedia gene ID: lnc-C5orf38-1
Location (hg19): chr5:2921146-2925280
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1318 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT100101
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 55.2846 non-coding 
CPAT coding probability 26.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-C5orf38-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C5orf38-1:8
4.0 lnc-C5orf38-1:8
4.1 lnc-C5orf38-1:8
5.0 lnc-C5orf38-1:8
5.1 lnc-CARD6-352:5
5.2 lnc-C5orf38-1:8