Transcript: lnc-C9-1:6

Basic information

LNCipedia transcript ID: lnc-C9-1:6 
LNCipedia gene ID: lnc-C9-1
Location (hg19): chr5:39331875-39424970
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 560 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT101120
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -39.9768 non-coding 
CPAT coding probability 52.47% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-C9-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9-1:6
4.0 lnc-C9-1:6
4.1 lnc-C9-1:6
5.0 lnc-C9-1:6
5.1 lnc-SELENOP-46:6
5.2 lnc-C9-1:6