Transcript: lnc-C9orf116-7:1

Basic information

LNCipedia transcript ID: lnc-C9orf116-7:1 
LNCipedia gene ID: lnc-C9orf116-7
Location (hg19): chr9:138281632-138287962
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4604 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_3871_chr9:138281631-138287640_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.4609 non-coding 
CPAT coding probability 70.14% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-C9orf116-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf116-7:1
4.0 lnc-C9orf116-7:1
4.1 lnc-C9orf116-7:1
5.0 lnc-C9orf116-7:1
5.1 lnc-CAMSAP1-10:1
5.2 lnc-C9orf116-7:1