Transcript: lnc-C9orf129-1:1

Basic information

LNCipedia transcript ID: lnc-C9orf129-1:1 
LNCipedia gene ID: lnc-C9orf129-1
Location (hg19): chr9:95978710-96006669
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1312 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc004auk_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -206.0867 non-coding 
CPAT coding probability 0.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C9orf129-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf129-1:1
4.0 lnc-C9orf129-1:1
4.1 lnc-C9orf129-1:1
5.0 lnc-C9orf129-1:1
5.1 lnc-FANCC-48:1
5.2 lnc-C9orf129-1:1