Transcript: lnc-CA7-4:2

Basic information

LNCipedia transcript ID: lnc-CA7-4:2 
LNCipedia gene ID: lnc-CA7-4
RefSeq ID: NR_133569
Location (hg19): chr16:66785655-66788646
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2897 bp
Exons: 2
Sources: NONCODE v4; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT143040; NR_133569.1
Alternative gene names: LOC106699570


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -44.3656 non-coding 
CPAT coding probability 1.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CA7-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CA7-4:2
4.0 lnc-CA7-4:2
4.1 lnc-CA7-4:2
5.0 lnc-CA7-4:2
5.1 lnc-NOL3-32:3
5.2 lnc-CA7-4:2