Transcript: lnc-CAAP1-4:4

Basic information

LNCipedia transcript ID: lnc-CAAP1-4:4 
LNCipedia gene ID: lnc-CAAP1-4
Location (hg19): chr9:26261006-26261933
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 511 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000108026.1|FTMT23300030975.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.6746 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CAAP1-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C9orf82-4:5
5.0 lnc-C9orf82-4:5
5.1 lnc-CD72-108:4
5.2 lnc-CAAP1-4:4