Transcript: lnc-CAB39L-8:2

Basic information

LNCipedia transcript ID: lnc-CAB39L-8:2 
LNCipedia gene ID: lnc-CAB39L-8
Location (hg19): chr13:49476468-49524781
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 836 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000017113.1|MICT00000094434.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -223.9016 non-coding 
CPAT coding probability 1.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CAB39L-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CAB39L-8:2
5.0 lnc-CAB39L-8:2
5.1 lnc-CCDC169-146:1
5.2 lnc-CAB39L-8:2