Transcript: lnc-CABCOCO1-1:1

Basic information

LNCipedia transcript ID: lnc-CABCOCO1-1:1 
LNCipedia gene ID: lnc-CABCOCO1-1
Location (hg19): chr10:63238855-63242889
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 440 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018214; NONHSAT013564
Alternative gene names: XLOC_008495; linc-C10orf107-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.2183 non-coding 
CPAT coding probability 1.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CABCOCO1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C10orf107-1:1
3.1 lnc-C10orf107-1:1
4.0 TMEM26-AS1:5
4.1 TMEM26-AS1:5
5.0 TMEM26-AS1:5
5.1 lnc-MTRNR2L5-269:1
5.2 lnc-CABCOCO1-1:1