Transcript: lnc-CABCOCO1-1:5

Basic information

LNCipedia transcript ID: lnc-CABCOCO1-1:5 
LNCipedia gene ID: lnc-CABCOCO1-1
RefSeq ID: NR_120645
Location (hg19): chr10:63239799-63253191
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 476 bp
Exons: 5
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120645.1
Alternative gene names: TMEM26-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -117.2111 non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CABCOCO1-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 TMEM26-AS1:12
5.1 lnc-MTRNR2L5-269:5
5.2 lnc-CABCOCO1-1:5