Transcript: lnc-CABCOCO1-1:6

Basic information

LNCipedia transcript ID: lnc-CABCOCO1-1:6 
LNCipedia gene ID: lnc-CABCOCO1-1
Location (hg19): chr10:63241607-63256038
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2208 bp
Exons: 5
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT013565; FPKM1_group_3375_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.2269 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CABCOCO1-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf107-1:6
4.0 TMEM26-AS1:8
4.1 TMEM26-AS1:8
5.0 TMEM26-AS1:8
5.1 lnc-MTRNR2L5-269:6
5.2 lnc-CABCOCO1-1:6