Transcript: lnc-CABCOCO1-1:8

Basic information

LNCipedia transcript ID: lnc-CABCOCO1-1:8 
LNCipedia gene ID: lnc-CABCOCO1-1
Location (hg19): chr10:63253054-63255993
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 661 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018740; NONHSAT013567
Alternative gene names: XLOC_008495; linc-C10orf107-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.2269 non-coding 
CPAT coding probability 3.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CABCOCO1-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C10orf107-1:3
3.1 lnc-C10orf107-1:3
4.0 TMEM26-AS1:10
4.1 TMEM26-AS1:10
5.0 TMEM26-AS1:10
5.1 lnc-MTRNR2L5-269:8
5.2 lnc-CABCOCO1-1:8