Transcript: lnc-CADM1-4:6

Basic information

LNCipedia transcript ID: lnc-CADM1-4:6 
LNCipedia gene ID: lnc-CADM1-4
Location (hg19): chr11:115906353-115943947
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 312 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT024334
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -229.1939 non-coding 
CPAT coding probability 4.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CADM1-4:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CADM1-4:6
4.0 lnc-CADM1-4:6
4.1 lnc-CADM1-4:6
5.0 lnc-CADM1-4:6
5.1 lnc-SCN4B-50:11
5.2 lnc-CADM1-4:6