Transcript: lnc-CAND2-2:4

Basic information

LNCipedia transcript ID: lnc-CAND2-2:4 
LNCipedia gene ID: lnc-CAND2-2
Location (hg19): chr3:13051090-13054227
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2291 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000059209.1|ENCT00000285730.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -100.9991 non-coding 
CPAT coding probability 1.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CAND2-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CAND2-2:4
5.0 lnc-CAND2-2:4
5.1 lnc-MKRN2-8:3
5.2 lnc-CAND2-2:4