Transcript: lnc-CAPN12-2:2

Basic information

LNCipedia transcript ID: lnc-CAPN12-2:2 
LNCipedia gene ID: lnc-CAPN12-2
Location (hg19): chr19:39101740-39105138
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 757 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT066227
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -165.5004 non-coding 
CPAT coding probability 11.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CAPN12-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CAPN12-2:2
4.0 lnc-CAPN12-2:2
4.1 lnc-CAPN12-2:2
5.0 lnc-CAPN12-2:2
5.1 lnc-CCER2-15:2
5.2 lnc-CAPN12-2:2