Transcript: lnc-CAPN12-3:1

Basic information

LNCipedia transcript ID: lnc-CAPN12-3:1 
LNCipedia gene ID: lnc-CAPN12-3
Location (hg19): chr19:39078314-39084009
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 232 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT066225
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -420.1447 non-coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CAPN12-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CAPN12-3:1
4.0 lnc-CAPN12-3:1
4.1 lnc-CAPN12-3:1
5.0 lnc-CAPN12-3:1
5.1 lnc-CCER2-16:1
5.2 lnc-CAPN12-3:1