Transcript: lnc-CAPZA2-2:8

Basic information

LNCipedia transcript ID: lnc-CAPZA2-2:8 
LNCipedia gene ID: lnc-CAPZA2-2
Ensembl Gene ID: ENSG00000214188
Ensembl Transcript ID: ENST00000397750
Location (hg19): chr7:116593953-116599871
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1576 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000397750.7
Alternative gene names: ENSG00000214188.9; ST7-OT4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -11.4685 non-coding 
CPAT coding probability 17.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CAPZA2-2:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ST7-OT4-2:2
4.1 lnc-ST7-OT4-2:2
5.0 lnc-ST7-OT4-2:2
5.1 lnc-MET-2:2
5.2 lnc-CAPZA2-2:8