Transcript: lnc-CARD11-22:1

Basic information

LNCipedia transcript ID: lnc-CARD11-22:1 
LNCipedia gene ID: lnc-CARD11-22
Location (hg19): chr7:3186629-3214287
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 554 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00012898
Alternative gene names: XLOC_006339; linc-CARD11-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.7301 non-coding 
CPAT coding probability 13.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CARD11-22:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC091801.1.1-1:1
3.1 lnc-AC091801.1.1-1:1
4.0 lnc-AC091801.1.1-1:1
4.1 lnc-AC091801.1.1-1:1
5.0 lnc-AC091801.1.1-1:1
5.1 lnc-GRIFIN-22:1
5.2 lnc-CARD11-22:1