Transcript: lnc-CARD11-8:5

Basic information

LNCipedia transcript ID: lnc-CARD11-8:5 
LNCipedia gene ID: lnc-CARD11-8
Ensembl Gene ID: ENSG00000236708
Ensembl Transcript ID: ENST00000437354
Location (hg19): chr7:3303664-3342084
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 982 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000437354.1; AC073316.1-001; OTTHUMT00000323713.1; NONHSAT118849
Alternative gene names: ENSG00000236708.1; AC073316.1; OTTHUMG00000151736.1; AC073316.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.5149 non-coding 
CPAT coding probability 2.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CARD11-8:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC091801.1.1-6:1
4.0 lnc-AC091801.1.1-6:1
4.1 lnc-AC091801.1.1-4:6
5.0 lnc-AC091801.1.1-4:6
5.1 lnc-GRIFIN-29:5
5.2 lnc-CARD11-8:5