Transcript: lnc-CBLB-3:4

Basic information

LNCipedia transcript ID: lnc-CBLB-3:4 
LNCipedia gene ID: lnc-CBLB-3
Location (hg19): chr3:106096979-106146792
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1198 bp
Exons: 9
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006575; NONHSAT090982
Alternative gene names: XLOC_003199; linc-CBLB-10


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.6339 non-coding 
CPAT coding probability 7.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CBLB-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CBLB-3:5
3.1 lnc-CBLB-3:4
4.0 lnc-CBLB-3:4
4.1 lnc-CBLB-3:4
5.0 lnc-CBLB-3:4
5.1 lnc-IFT57-25:5
5.2 lnc-CBLB-3:4