Transcript: lnc-CBLL1-1:1

Basic information

LNCipedia transcript ID: lnc-CBLL1-1:1 
LNCipedia gene ID: lnc-CBLL1-1
Location (hg19): chr7:107383247-107384360
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 670 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000437450.1; AC002467.5-001; OTTHUMT00000337147.1; NONHSAT122708
Alternative gene names: ENSG00000241292.1; AC002467.5; OTTHUMG00000154806.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -40.8213 non-coding 
CPAT coding probability 16.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CBLL1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CBLL1-1:1
4.0 lnc-CBLL1-1:1
4.1 lnc-CBLL1-1:1
5.0 lnc-CBLL1-1:1
5.1 lnc-KMT2E-48:1
5.2 lnc-CBLL1-1:1