Transcript: lnc-CCDC180-4:1

Basic information

LNCipedia transcript ID: lnc-CCDC180-4:1 
LNCipedia gene ID: lnc-CCDC180-4
Location (hg19): chr9:99984497-99995791
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 907 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT133491
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 135.9523 coding 
CPAT coding probability 62.42% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CCDC180-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf174-1:2
4.0 lnc-C9orf174-4:1
4.1 lnc-C9orf174-4:1
5.0 lnc-C9orf174-4:1
5.1 lnc-FAM120A-102:1
5.2 lnc-CCDC180-4:1