Transcript: lnc-CCDC184-1:1

Basic information

LNCipedia transcript ID: lnc-CCDC184-1:1 
LNCipedia gene ID: lnc-CCDC184-1
Location (hg19): chr12:48606567-48619721
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 276 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020406; NONHSAT027989
Alternative gene names: XLOC_009734; linc-H1FNT


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -39.5012 non-coding 
CPAT coding probability 2.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC184-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C12orf68-1:1
3.1 lnc-C12orf68-1:1
4.0 lnc-C12orf68-1:1
4.1 lnc-C12orf68-1:1
5.0 lnc-C12orf68-1:1
5.1 lnc-SLC48A1-21:1
5.2 lnc-CCDC184-1:1