Transcript: lnc-CCDC33-5:1

Basic information

LNCipedia transcript ID: lnc-CCDC33-5:1 
LNCipedia gene ID: lnc-CCDC33-5
Ensembl Gene ID: ENSG00000274937
Ensembl Transcript ID: ENST00000611178
Location (hg19): chr15:74667019-74667852
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 834 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000611178.1
Alternative gene names: ENSG00000274937.1; CTD-2311M21.4; AC090826.3; AC090826.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -31.3512 non-coding 
CPAT coding probability 1.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC33-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CCDC33-5:1
4.1 lnc-CCDC33-5:1
5.0 lnc-CCDC33-5:1
5.1 lnc-CCDC33-5:1
5.2 lnc-CCDC33-5:1