Transcript: lnc-CCDC57-6:5

Basic information

LNCipedia transcript ID: lnc-CCDC57-6:5 
LNCipedia gene ID: lnc-CCDC57-6
Location (hg19): chr17:80202598-80202989
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 295 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT056668
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -296.6468 non-coding 
CPAT coding probability 11.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC57-6:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CSNK1D-2:9
4.0 lnc-CSNK1D-2:9
4.1 lnc-CSNK1D-2:9
5.0 lnc-CSNK1D-2:9
5.1 lnc-CD7-5:5
5.2 lnc-CCDC57-6:5