Transcript: lnc-CCDC7-17:1

Basic information

LNCipedia transcript ID: lnc-CCDC7-17:1 
LNCipedia gene ID: lnc-CCDC7-17
Location (hg19): chr10:33859700-33866091
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1264 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_288_chr10:33859699-33866091_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -66.0633 non-coding 
CPAT coding probability 3.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC7-17:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf68-14:1
4.0 lnc-C10orf68-14:1
4.1 lnc-C10orf68-14:1
5.0 lnc-C10orf68-14:1
5.1 lnc-NPY4R2-161:1
5.2 lnc-CCDC7-17:1