Transcript: lnc-CCER1-1:4

Basic information

LNCipedia transcript ID: lnc-CCER1-1:4 
LNCipedia gene ID: lnc-CCER1-1
Location (hg19): chr12:91299314-91312458
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1296 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020868; NONHSAT029850
Alternative gene names: XLOC_010150; linc-ATP2B1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.2908 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCER1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C12orf12-1:1
3.1 lnc-C12orf12-1:1
4.0 lnc-C12orf12-1:1
4.1 lnc-C12orf12-1:1
5.0 lnc-C12orf12-1:1
5.1 lnc-CCER1-1:2
5.2 lnc-CCER1-1:4