Transcript: lnc-CCM2-1:4

Basic information

LNCipedia transcript ID: lnc-CCM2-1:4 
LNCipedia gene ID: lnc-CCM2-1
Location (hg19): chr7:45026337-45032675
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3718 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000092162.1|MICT00000323016.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 25.794 non-coding 
CPAT coding probability 1.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCM2-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CCM2-1:4
5.0 lnc-CCM2-1:4
5.1 lnc-CCT6A-127:2
5.2 lnc-CCM2-1:4