Transcript: lnc-CCNF-4:2

Basic information

LNCipedia transcript ID: lnc-CCNF-4:2 
LNCipedia gene ID: lnc-CCNF-4
Location (hg19): chr16:2389291-2417125
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 418 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT052101
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 65.4915 coding 
CPAT coding probability 1.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CCNF-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCNF-3:2
4.0 lnc-CCNF-4:2
4.1 lnc-CCNF-4:2
5.0 lnc-CCNF-4:2
5.1 lnc-DNASE1L2-11:2
5.2 lnc-CCNF-4:2