Transcript: lnc-CCNJ-1:20

Basic information

LNCipedia transcript ID: lnc-CCNJ-1:20 
LNCipedia gene ID: lnc-CCNJ-1
Location (hg19): chr10:97889479-97896097
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3240 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000177853.10|FTMT23900014064.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -41.7357 non-coding 
CPAT coding probability 12.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCNJ-1:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CCNJ-1:20
5.0 lnc-CCNJ-1:20
5.1 lnc-SMC3-205:2
5.2 lnc-CCNJ-1:20