Transcript: lnc-CCNYL1-2:2

Basic information

LNCipedia transcript ID: lnc-CCNYL1-2:2 
LNCipedia gene ID: lnc-CCNYL1-2
Location (hg19): chr2:208462072-208464480
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 813 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000451164.1; AC079767.2-002; OTTHUMT00000337041.1; NONHSAT076611
Alternative gene names: ENSG00000242128.1; AC079767.2; OTTHUMG00000154783.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -39.0235 non-coding 
CPAT coding probability 1.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCNYL1-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCNYL1-2:2
4.0 lnc-CCNYL1-2:2
4.1 lnc-CCNYL1-2:2
5.0 lnc-CCNYL1-2:2
5.1 lnc-CPS1-35:2
5.2 lnc-CCNYL1-2:2