Transcript: lnc-CCR3-1:1

Basic information

LNCipedia transcript ID: lnc-CCR3-1:1 
LNCipedia gene ID: lnc-CCR3-1
Location (hg19): chr3:46140162-46145509
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2130 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000059988.1|MICT00000241569.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.0447 non-coding 
CPAT coding probability 1.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCR3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CCR3-1:1
5.0 lnc-CCR3-1:1
5.1 lnc-RTP3-9:1
5.2 lnc-CCR3-1:1