Transcript: lnc-CCSAP-1:1

Basic information

LNCipedia transcript ID: lnc-CCSAP-1:1 
LNCipedia gene ID: lnc-CCSAP-1
Location (hg19): chr1:229406674-229407346
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 673 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT010075
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.9821 non-coding 
CPAT coding probability 72.30% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CCSAP-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf96-1:3
4.0 lnc-C1orf96-1:3
4.1 lnc-C1orf96-1:3
5.0 lnc-C1orf96-1:3
5.1 lnc-TRIM17-26:1
5.2 lnc-CCSAP-1:1