Transcript: lnc-CCT7-1:1

Basic information

LNCipedia transcript ID: lnc-CCT7-1:1 
LNCipedia gene ID: lnc-CCT7-1
Location (hg19): chr2:73511662-73518113
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5127 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000500494; NONHSAT071616
Alternative gene names: ENSG00000246432; AC010913.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -44.1584 non-coding 
CPAT coding probability 2.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCT7-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CCT7-1:1
3.1 lnc-CCT7-1:1
4.0 lnc-CCT7-1:1
4.1 lnc-CCT7-1:1
5.0 lnc-CCT7-1:1
5.1 lnc-POLE4-61:1
5.2 lnc-CCT7-1:1