Transcript: lnc-CCT8L2-7:1

Basic information

LNCipedia transcript ID: lnc-CCT8L2-7:1 
LNCipedia gene ID: lnc-CCT8L2-7
Location (hg19): chr22:16373081-16377057
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1732 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029329; NONHSAT083108
Alternative gene names: XLOC_014135; linc-IL17RA-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 54.8951 non-coding 
CPAT coding probability 1.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CCT8L2-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IL17RA-6:1
3.1 lnc-IL17RA-7:2
4.0 lnc-IL17RA-7:2
4.1 lnc-IL17RA-7:2
5.0 lnc-IL17RA-7:2
5.1 lnc-RTN4R-88:1
5.2 lnc-CCT8L2-7:1